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Bradi5g13000


Description : RAB GTPase homolog B1C


Gene families : OG_42_0001882 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001882_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g13000
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Cre09.g390763 No alias RAB GTPase homolog B1C 0.01 Orthogroups_2024-Update
Kfl00232_0050 kfl00232_0050_v1.1 (p36863|yptv4_volca : 344.0) GTP-binding protein yptV4... 0.03 Orthogroups_2024-Update
Sobic.004G196300.1 No alias B-class RAB GTPase 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA InterProScan predictions
MF GO:0005525 GTP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016311 dephosphorylation IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 8 167
No external refs found!