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  5. Bradi5g13560

Bradi5g13560


Description : Cellulase (glycosyl hydrolase family 5) protein


Gene families : OG_42_0001390 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001390_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g13560
Cluster HCCA clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
At1g13130 No alias At1g13130 [Source:UniProtKB/TrEMBL;Acc:Q66GP7] 0.02 Orthogroups_2024-Update
Brara.F03291.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.11G179700 No alias Cellulase (glycosyl hydrolase family 5) protein 0.04 Orthogroups_2024-Update
MA_318998g0010 No alias (at1g13130 : 577.0) Cellulase (glycosyl hydrolase family... 0.05 Orthogroups_2024-Update
MA_8507901g0010 No alias (at3g26140 : 373.0) Cellulase (glycosyl hydrolase family... 0.02 Orthogroups_2024-Update
PSME_00027375-RA No alias (at3g26140 : 412.0) Cellulase (glycosyl hydrolase family... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
InterPro domains Description Start Stop
IPR001547 Glyco_hydro_5 73 351
No external refs found!