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  5. Bradi5g14930

Bradi5g14930


Description : GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain


Gene families : OG_42_0003569 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g14930
Cluster HCCA clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Glyma.18G031866 No alias GC-rich sequence DNA-binding factor-like protein with... 0.03 Orthogroups_2024-Update
LOC_Os12g42140 No alias G-patch domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s162_98V6 No alias tuftelin interacting protein 11 0.01 Orthogroups_2024-Update
Sobic.006G144900.1 No alias spliceosome disassembly factor *(STIPL) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0005375 copper ion transmembrane transporter activity IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0035434 copper ion transmembrane transport IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0098772 molecular function regulator IEP Predicted GO
InterPro domains Description Start Stop
IPR022783 GCFC_dom 138 285
IPR000467 G_patch_dom 14 55
No external refs found!