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  5. Solyc02g078790

Solyc02g078790


Description : Transcription factor jumonji domain protein (AHRD V3.3 *** G7I8M9_MEDTR)


Gene families : OG_42_0000491 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g078790
Cluster HCCA clusters: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
At1g09060 No alias JmjC domain protein JMJ24 [Source:UniProtKB/TrEMBL;Acc:F4HZD1] 0.03 Orthogroups_2024-Update
At4g00990 No alias Transcription factor jumonji (JmjC) domain-containing... 0.03 Orthogroups_2024-Update
At4g21430 No alias Protein B160 [Source:UniProtKB/TrEMBL;Acc:Q8H1S7] 0.04 Orthogroups_2024-Update
Bradi3g01060 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.03 Orthogroups_2024-Update
Brara.I01463.1 No alias histone demethylase *(KDM3) 0.03 Orthogroups_2024-Update
GRMZM2G383210 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.02 Orthogroups_2024-Update
GRMZM2G428933 No alias Zinc finger, RING-type;Transcription factor... 0.02 Orthogroups_2024-Update
HORVU4Hr1G047030.11 No alias histone demethylase *(KDM3) & auxiliary component... 0.03 Orthogroups_2024-Update
LOC_Os09g22540 No alias transcription factor jumonji, putative, expressed 0.02 Orthogroups_2024-Update
Seita.1G005800.1 No alias histone demethylase *(KDM3) 0.04 Orthogroups_2024-Update
Sopen02g023610 No alias WRC 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0007264 small GTPase mediated signal transduction IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
BP GO:0030259 lipid glycosylation IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0045735 nutrient reservoir activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR018866 Znf-4CXXC_R1 189 258
IPR003347 JmjC_dom 728 822
IPR014977 WRC_dom 53 93
No external refs found!