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  5. Bradi5g17087

Bradi5g17087


Description : COBRA-like protein 1 precursor


Gene families : OG_42_0000486 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000486_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g17087
Cluster HCCA clusters: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
At3g29810 No alias COBRA-like protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8L8Q7] 0.03 Orthogroups_2024-Update
Brara.H02796.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
Glyma.02G196100 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.04 Orthogroups_2024-Update
Glyma.06G005800 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Glyma.13G053200 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.03 Orthogroups_2024-Update
Glyma.13G053300 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
Glyma.19G033600 No alias COBRA-like extracellular glycosyl-phosphatidyl... 0.02 Orthogroups_2024-Update
HORVU0Hr1G004650.4 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.08 Orthogroups_2024-Update
HORVU5Hr1G096010.36 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.03 Orthogroups_2024-Update
LOC_Os07g41320 No alias COBRA-like protein precursor, putative, expressed 0.02 Orthogroups_2024-Update
Mp7g06600.1 No alias COB cellulose microfibrils and hemicellulose interaction protein 0.02 Orthogroups_2024-Update
Potri.004G167100 No alias COBRA-like protein 1 precursor 0.02 Orthogroups_2024-Update
Sobic.001G336700.1 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.05 Orthogroups_2024-Update
Solyc02g089130 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.02 Orthogroups_2024-Update
Solyc03g114890 No alias COBRA-like protein (AHRD V3.3 *** L0ATP1_POPTO) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA InterProScan predictions
BP GO:0016049 cell growth IEA InterProScan predictions
CC GO:0031225 anchored component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR006918 COBRA_pln 126 292
No external refs found!