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  5. Bradi5g17160

Bradi5g17160


Description : long-chain base (LCB) kinase 1


Gene families : OG_42_0002783 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002783_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g17160
Cluster HCCA clusters: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
HORVU1Hr1G047730.9 No alias sphingoid long-chain base kinase *(LCBK1) 0.03 Orthogroups_2024-Update
HORVU4Hr1G021780.1 No alias sphingoid long-chain base kinase *(LCBK1) 0.03 Orthogroups_2024-Update
LOC_Os04g45800 No alias diacylglycerol kinase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00038116-RA No alias (at5g23450 : 741.0) Encodes a sphingosine kinase that... 0.03 Orthogroups_2024-Update
Potri.010G255600 No alias long-chain base (LCB) kinase 1 0.04 Orthogroups_2024-Update
Sobic.006G163800.1 No alias sphingoid long-chain base kinase *(LCBK1) & EC_2.7... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016301 kinase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005643 nuclear pore IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
BP GO:0006405 RNA export from nucleus IEP Predicted GO
BP GO:0006406 mRNA export from nucleus IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006476 protein deacetylation IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006913 nucleocytoplasmic transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
BP GO:0016575 histone deacetylation IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0016973 poly(A)+ mRNA export from nucleus IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Predicted GO
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0035601 protein deacylation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0050657 nucleic acid transport IEP Predicted GO
BP GO:0050658 RNA transport IEP Predicted GO
BP GO:0051028 mRNA transport IEP Predicted GO
BP GO:0051168 nuclear export IEP Predicted GO
BP GO:0051169 nuclear transport IEP Predicted GO
BP GO:0051236 establishment of RNA localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0098732 macromolecule deacylation IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001206 Diacylglycerol_kinase_cat_dom 230 361
No external refs found!