Bradi5g17640

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi5g17640
Cluster	HCCA clusters: Cluster_44

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.03	Orthogroups_2024-Update
A4A49_15668	No alias	ethylene-responsive transcription factor rap2-12	0.04	Orthogroups_2024-Update
A4A49_38622	No alias	dehydration-responsive element-binding protein 3	0.02	Orthogroups_2024-Update
At1g22985	No alias	CRF7 [Source:UniProtKB/TrEMBL;Acc:A0A178W874]	0.03	Orthogroups_2024-Update
At1g68550	No alias	Ethylene-responsive transcription factor ERF118...	0.03	Orthogroups_2024-Update
At1g77200	No alias	Ethylene-responsive transcription factor ERF037...	0.05	Orthogroups_2024-Update
At3g20310	No alias	Ethylene-responsive transcription factor 7...	0.03	Orthogroups_2024-Update
At4g17500	No alias	Ethylene-responsive transcription factor 1A...	0.05	Orthogroups_2024-Update
At5g18560	No alias	PUCHI [Source:UniProtKB/TrEMBL;Acc:A0A178URC3]	0.03	Orthogroups_2024-Update
Bradi3g08790	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi3g18070	No alias	ethylene response factor 7	0.02	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Brara.A01860.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.A03156.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.B00253.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.B00844.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.04	Orthogroups_2024-Update
Brara.C01790.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.D01564.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.E02969.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.F01354.1	No alias	subgroup ERF-II transcription factor *(ERF16/17/18)	0.02	Orthogroups_2024-Update
Brara.G03123.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.I01983.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Brara.I04175.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.J00757.1	No alias	transcription factor *(CBF/DREB1) & subgroup ERF-III...	0.03	Orthogroups_2024-Update
Brara.K00687.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G149756	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G156006	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G169382	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.03G112100	No alias	ethylene-responsive element binding factor 13	0.03	Orthogroups_2024-Update
Glyma.04G041200	No alias	DREB and EAR motif protein 3	0.03	Orthogroups_2024-Update
Glyma.04G217400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.05G062100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.07G110000	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.09G242600	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
Glyma.10G194200	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.11G199300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.13G233900	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.16G023800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G145400	No alias	ethylene responsive element binding factor 1	0.05	Orthogroups_2024-Update
Glyma.18G091600	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.18G252300	No alias	ethylene-responsive element binding factor 13	0.05	Orthogroups_2024-Update
HORVU4Hr1G079630.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g08340	No alias	AP2 domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_10431529g0030	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_10432141g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_12171g0010	No alias	(at5g21960 : 119.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_12547g0010	No alias	(at5g25810 : 85.9) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_13408g0010	No alias	(at1g21910 : 95.9) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_446533g0010	No alias	(at4g16750 : 126.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_5280013g0010	No alias	(at1g74930 : 121.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_97319g0010	No alias	(at3g16280 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Mp1g20040.1	No alias	transcription factor (ERF)	0.02	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.03	Orthogroups_2024-Update
PSME_00009547-RA	No alias	(at4g17500 : 103.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00014384-RA	No alias	(at5g21960 : 93.6) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00037661-RA	No alias	(at4g17500 : 149.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
Potri.001G181500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.002G043300	No alias	erf domain protein 9	0.02	Orthogroups_2024-Update
Potri.002G065600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G094200	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Potri.014G046700	No alias	ethylene-responsive element binding factor 13	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.02	Orthogroups_2024-Update
Pp1s25_13V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_50V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s276_72V6	No alias	ap2 erf domain-containing transcription factor	0.04	Orthogroups_2024-Update
Seita.2G269600.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G272600.1	No alias	transcription factor component *(HRE/RAP2.12) of...	0.03	Orthogroups_2024-Update
Seita.5G348000.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G428700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Sobic.002G081300.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.02	Orthogroups_2024-Update
Sobic.002G260800.1	No alias	Unknown function	0.05	Orthogroups_2024-Update
Sobic.004G179900.1	No alias	subgroup ERF-III transcription factor	0.06	Orthogroups_2024-Update
Sobic.005G103000.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Sobic.006G259000.1	No alias	subgroup ERF-VIII transcription factor	0.04	Orthogroups_2024-Update
Sobic.009G170800.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Solyc03g093530	No alias	ethylene-responsive transcription factor (AHRD V3.3 -...	0.04	Orthogroups_2024-Update
Solyc03g116610	No alias	Ethylene-responsive transcription factor WIN1 (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc04g071770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc04g078640	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.02	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update
Solyc06g082590	No alias	DNA-binding protein Pti6	0.03	Orthogroups_2024-Update
Sopen02g016210	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen02g033000	No alias	AP2 domain	0.07	Orthogroups_2024-Update
Sopen02g035400	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen03g005150	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen06g026100	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen08g003200	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen12g001920	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	39	87

External Links

No external refs found!

Bradi5g17640

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation