Bradi5g18640


Description : Dof-type zinc finger DNA-binding family protein


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g18640

Target Alias Description ECC score Gene Family Method Actions
A4A49_24184 No alias dof zinc finger protein dof3.1 0.03 Orthogroups_2024-Update
At4g38000 No alias DOF4.7 [Source:UniProtKB/TrEMBL;Acc:A0A178V5K8] 0.02 Orthogroups_2024-Update
Brara.C01888.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.20G216600 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G119160.3 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.02 Orthogroups_2024-Update
Seita.2G436800.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc03g112930 No alias Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 0.03 Orthogroups_2024-Update
Solyc06g069760 No alias Dof zinc finger protein 22 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003851 Znf_Dof 78 134
No external refs found!