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  5. Bradi5g18647

Bradi5g18647


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_42_0000437 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000437_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g18647
Cluster HCCA clusters: Cluster_238

Target Alias Description ECC score Gene Family Method Actions
A4A49_32864 No alias compass-like h3k4 histone methylase component wdr5a 0.02 Orthogroups_2024-Update
Bradi5g26250 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.J00848.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G055437 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os04g44700 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g07874 No alias WD-40 repeat family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_18161g0010 No alias (at3g15470 : 336.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Solyc08g008490 No alias WD-repeat protein, putative (AHRD V3.3 *** B9RYR0_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 513 536
IPR001680 WD40_repeat 365 402
IPR001680 WD40_repeat 227 259
IPR001680 WD40_repeat 324 360
No external refs found!