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  5. Bradi5g18710

Bradi5g18710


Description : replication factor C 2


Gene families : OG_42_0006612 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006612_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g18710
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
90486 No alias replication factor C 2 0.03 Orthogroups_2024-Update
A4A49_40673 No alias replication factor c subunit 2 0.03 Orthogroups_2024-Update
Seita.7G203200.1 No alias component *(RFC2) of PCNA sliding clamp loader complex 0.06 Orthogroups_2024-Update
Sobic.006G183100.1 No alias component *(RFC2) of PCNA sliding clamp loader complex 0.06 Orthogroups_2024-Update
Sopen08g028830 No alias Replication factor C C-terminal domain 0.04 Orthogroups_2024-Update
evm.model.tig00000042.30 No alias (at1g63160 : 390.0) replication factor C 2 (RFC2);... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR013748 Rep_factorC_C 238 323
IPR003959 ATPase_AAA_core 52 170
No external refs found!