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  5. Bradi5g20660

Bradi5g20660


Description : differentiation and greening-like 1


Gene families : OG_42_0000510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g20660
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
A4A49_31672 No alias multiple organellar rna editing factor 3, mitochondrial 0.03 Orthogroups_2024-Update
At1g11430 No alias Multiple organellar RNA editing factor 9, chloroplastic... 0.03 Orthogroups_2024-Update
At3g15000 No alias Multiple organellar RNA editing factor 8,... 0.02 Orthogroups_2024-Update
Brara.A01086.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.A03163.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Brara.C03552.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.D02033.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Brara.D02132.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Brara.E00914.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Brara.E01050.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
Brara.E02636.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Brara.F00767.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
Brara.G00411.1 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
Brara.K01028.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Brara.K01789.1 No alias RNA editing factor *(MORF) 0.02 Orthogroups_2024-Update
GRMZM2G003765 No alias plastid developmental protein DAG, putative 0.05 Orthogroups_2024-Update
GRMZM2G383540 No alias plastid developmental protein DAG, putative 0.04 Orthogroups_2024-Update
GRMZM5G808811 No alias differentiation and greening-like 1 0.05 Orthogroups_2024-Update
Glyma.07G245000 No alias plastid developmental protein DAG, putative 0.03 Orthogroups_2024-Update
Glyma.10G005100 No alias differentiation and greening-like 1 0.04 Orthogroups_2024-Update
Glyma.10G183800 No alias differentiation and greening-like 1 0.03 Orthogroups_2024-Update
Glyma.13G271400 No alias cobalt ion binding 0.04 Orthogroups_2024-Update
HORVU2Hr1G101720.2 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
HORVU4Hr1G016440.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
HORVU7Hr1G073170.2 No alias RNA editing factor *(MORF) 0.05 Orthogroups_2024-Update
LOC_Os08g04450 No alias DAG protein, chloroplast precursor, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os09g04670 No alias DAG protein, chloroplast precursor, putative, expressed 0.03 Orthogroups_2024-Update
Potri.001G393400 No alias cobalt ion binding 0.02 Orthogroups_2024-Update
Potri.008G169900 No alias plastid developmental protein DAG, putative 0.06 Orthogroups_2024-Update
Potri.011G032900 No alias plastid developmental protein DAG, putative 0.02 Orthogroups_2024-Update
Potri.011G112200 No alias cobalt ion binding 0.05 Orthogroups_2024-Update
Seita.4G012800.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Seita.4G211100.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Seita.6G068800.1 No alias RNA editing factor *(MORF) 0.08 Orthogroups_2024-Update
Seita.6G225500.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Seita.7G225200.1 No alias RNA editing factor *(MORF) 0.09 Orthogroups_2024-Update
Seita.8G095000.1 No alias RNA editing factor *(MORF) 0.04 Orthogroups_2024-Update
Sobic.001G485600.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.005G100900.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.006G204100.1 No alias RNA editing factor *(MORF) 0.06 Orthogroups_2024-Update
Sobic.007G034500.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Sobic.010G013900.1 No alias RNA editing factor *(MORF) 0.03 Orthogroups_2024-Update
Solyc01g066060 No alias DAG protein (AHRD V3.3 *** K7TSG0_MAIZE) 0.02 Orthogroups_2024-Update
Solyc02g079770 No alias DAG protein (AHRD V3.3 *** B6TYI4_MAIZE) 0.05 Orthogroups_2024-Update
Solyc05g054960 No alias Peroxisome biogenesis protein 12 (AHRD V3.3 *** K4C2H2_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g008220 No alias DAG protein (AHRD V3.3 *** A0A0K9Q0F0_ZOSMR) 0.04 Orthogroups_2024-Update
Solyc10g007180 No alias DAG protein (AHRD V3.3 *** A0A0K9PW98_ZOSMR) 0.03 Orthogroups_2024-Update
Solyc12g014230 No alias DAG protein (AHRD V3.3 *** A0A0K9PW98_ZOSMR) 0.03 Orthogroups_2024-Update
Sopen02g024010 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen02g024540 No alias hypothetical protein 0.06 Orthogroups_2024-Update
Sopen05g033420 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen06g003080 No alias hypothetical protein 0.06 Orthogroups_2024-Update
Sopen10g003300 No alias hypothetical protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006353 DNA-templated transcription, termination IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006553 lysine metabolic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009085 lysine biosynthetic process IEP Predicted GO
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046451 diaminopimelate metabolic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!