Bradi5g21700

Description : K-box region and MADS-box transcription factor family protein

Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi5g21700
Cluster	HCCA clusters: Cluster_35

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18078	No alias	developmental protein sepallata 1	0.02	Orthogroups_2024-Update
At2g24840	No alias	Agamous-like MADS-box protein AGL61...	0.02	Orthogroups_2024-Update
At5g60910	No alias	Agamous-like MADS-box protein AGL8...	0.02	Orthogroups_2024-Update
Bradi1g27901	No alias	AGAMOUS-like 61	0.03	Orthogroups_2024-Update
Bradi1g69890	No alias	K-box region and MADS-box transcription factor family protein	0.04	Orthogroups_2024-Update
Bradi4g34680	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Brara.C00925.1	No alias	component *(PISTILLATA) of AP3-PISTILLATA organ-identity...	0.03	Orthogroups_2024-Update
Brara.C04645.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.G01735.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Brara.I02103.1	No alias	regulatory protein *(SEPALLATA) of floral meristem...	0.03	Orthogroups_2024-Update
Glyma.01G064100	No alias	K-box region and MADS-box transcription factor family protein	0.02	Orthogroups_2024-Update
Glyma.02G179300	No alias	AGAMOUS-like 62	0.03	Orthogroups_2024-Update
Glyma.02G185500	No alias	AGAMOUS-like 18	0.03	Orthogroups_2024-Update
Glyma.03G019300	No alias	AGAMOUS-like 20	0.02	Orthogroups_2024-Update
Glyma.05G163200	No alias	K-box region and MADS-box transcription factor family protein	0.01	Orthogroups_2024-Update
Glyma.06G117600	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.09G149000	No alias	AGAMOUS-like 6	0.02	Orthogroups_2024-Update
Glyma.09G266400	No alias	AGAMOUS-like 6	0.03	Orthogroups_2024-Update
Glyma.10G084700	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.10G084800	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.10G085600	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.10G085900	No alias	AGAMOUS-like 62	0.02	Orthogroups_2024-Update
Glyma.10G240500	No alias	AGAMOUS-like 42	0.03	Orthogroups_2024-Update
Glyma.18G004700	No alias	K-box region and MADS-box transcription factor family protein	0.03	Orthogroups_2024-Update
Glyma.20G136600	No alias	AGAMOUS-like 62	0.04	Orthogroups_2024-Update
HORVU1Hr1G008300.3	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os02g07430	No alias	OsMADS29 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g38770	No alias	OsMADS61 - MADS-box family gene with MIKCc type-box, expressed	0.02	Orthogroups_2024-Update
PSME_00013164-RA	No alias	(at4g11880 : 108.0) AGL12, AGL14, and AGL17 are all...	0.02	Orthogroups_2024-Update
Potri.003G119700	No alias	AGAMOUS-like 19	0.03	Orthogroups_2024-Update
Potri.007G087500	No alias	AGAMOUS-like 66	0.02	Orthogroups_2024-Update
Pp1s209_130V6	No alias	mads-box transcription factor	0.01	Orthogroups_2024-Update
Seita.4G160200.1	No alias	MADS/AGL-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G314400.1	No alias	MADS/AGL-type transcription factor	0.02	Orthogroups_2024-Update
Solyc12g056460	No alias	MADS box transcription factor (AHRD V3.3 *** C3PTE7_POPTO)	0.02	Orthogroups_2024-Update
Sopen01g045900	No alias	SRF-type transcription factor (DNA-binding and...	0.02	Orthogroups_2024-Update
Sopen08g021160	No alias	SRF-type transcription factor (DNA-binding and...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046983	protein dimerization activity	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0006814	sodium ion transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	10	57
IPR002487	TF_Kbox	82	162

External Links

No external refs found!

Bradi5g21700

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation