Bradi5g21920


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_42_0009607 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009607_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g21920
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G043740.9 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 348
IPR002885 Pentatricopeptide_repeat 176 224
IPR002885 Pentatricopeptide_repeat 246 292
No external refs found!