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  5. Bradi5g22570

Bradi5g22570


Description : protodermal factor 2


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g22570
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
A4A49_12947 No alias homeobox-leucine zipper protein glabra 2 0.03 Orthogroups_2024-Update
Bradi3g57567 No alias homeodomain GLABROUS 11 0.03 Orthogroups_2024-Update
Brara.H00913.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Brara.J00342.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G116658 No alias Homeobox-leucine zipper family protein / lipid-binding... 0.03 Orthogroups_2024-Update
Glyma.06G209302 No alias homeodomain GLABROUS 2 0.02 Orthogroups_2024-Update
LOC_Os08g19590 No alias Homeobox domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10433688g0010 No alias (at4g21750 : 540.0) Encodes a homeobox protein similar... 0.02 Orthogroups_2024-Update
MA_38472g0010 No alias (at4g00730 : 709.0) Encodes a homeodomain protein of the... 0.04 Orthogroups_2024-Update
PSME_00034651-RA No alias (at4g00730 : 649.0) Encodes a homeodomain protein of the... 0.02 Orthogroups_2024-Update
Pp1s209_10V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.5G079000.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Solyc10g018000 No alias Homeobox leucine zipper protein (AHRD V3.3 *** A0A072UAM9_MEDTR) 0.02 Orthogroups_2024-Update
Sopen03g004900 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004664 prephenate dehydratase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
BP GO:0006558 L-phenylalanine metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009094 L-phenylalanine biosynthetic process IEP Predicted GO
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
BP GO:0010207 photosystem II assembly IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0034357 photosynthetic membrane IEP Predicted GO
CC GO:0042651 thylakoid membrane IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Predicted GO
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002913 START_lipid-bd_dom 297 519
IPR001356 Homeobox_dom 115 168
No external refs found!