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  5. Bradi5g23307

Bradi5g23307


Description : Phototropic-responsive NPH3 family protein


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g23307
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Bradi3g47620 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Bradi4g25900 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Brara.I00961.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Brara.I03328.1 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 Orthogroups_2024-Update
GRMZM2G025880 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.02G061400 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.05G104000 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Glyma.08G069800 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
Glyma.11G200201 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G015480.1 No alias substrate adaptor *(NPH3) of CUL3-BTB E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G053490.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g35970 No alias BTBN2 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain... 0.02 Orthogroups_2024-Update
LOC_Os12g02530 No alias BTBN22 - Bric-a-Brac, Tramtrack, Broad Complex BTB... 0.03 Orthogroups_2024-Update
MA_10430653g0010 No alias (at1g30440 : 376.0) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Pp1s190_58V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s454_11V6 No alias transposon protein mutator sub-class 0.04 Orthogroups_2024-Update
Pp1s53_256V6 No alias root phototropism 0.02 Orthogroups_2024-Update
Seita.8G012000.1 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Seita.9G169800.1 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.04 Orthogroups_2024-Update
Sobic.001G096900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.003G317000.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.006G120000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g107180 No alias Phototropic-responsive NPH3 family protein (AHRD V3.3... 0.05 Orthogroups_2024-Update
Sopen05g030030 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen07g022670 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR000210 BTB/POZ_dom 31 122
IPR027356 NPH3_dom 234 505
No external refs found!