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  5. Sopen07g017550

Sopen07g017550


Description : WD domain, G-beta repeat


Gene families : OG_42_0002836 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002836_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g017550
Cluster HCCA clusters: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
A4A49_04056 No alias wd-40 repeat-containing protein msi2 0.03 Orthogroups_2024-Update
AC208327.4_FG003 No alias Transducin family protein / WD-40 repeat family protein 0.02 Orthogroups_2024-Update
At2g19540 No alias Putative WD-40 repeat protein... 0.05 Orthogroups_2024-Update
Bradi4g26390 No alias Transducin family protein / WD-40 repeat family protein 0.05 Orthogroups_2024-Update
Brara.I04730.1 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.07 Orthogroups_2024-Update
Cre17.g724850 No alias Transducin family protein / WD-40 repeat family protein 0.01 Orthogroups_2024-Update
Glyma.05G147800 No alias Transducin family protein / WD-40 repeat family protein 0.05 Orthogroups_2024-Update
Kfl00691_0010 kfl00691_0010_v1.1 (at2g19540 : 423.0) Transducin family protein / WD-40... 0.02 Orthogroups_2024-Update
LOC_Os12g03822 No alias WD domain, G-beta repeat domain containing protein, expressed 0.03 Orthogroups_2024-Update
Pp1s46_317V6 No alias glutamate-rich wd repeat-containing protein 1 0.03 Orthogroups_2024-Update
Seita.7G311500.1 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.02 Orthogroups_2024-Update
Sobic.008G016100.1 No alias substrate adaptor *(HTD1/DWD1) of CUL4-based E3... 0.04 Orthogroups_2024-Update
Solyc07g039200 No alias WD-repeat protein, putative (AHRD V3.3 *** B9SP08_RICCO) 0.05 Orthogroups_2024-Update
evm.model.contig_3542.9 No alias (at2g19540 : 247.0) Transducin family protein / WD-40... 0.01 Orthogroups_2024-Update
evm.model.tig00001493.9 No alias (at2g19540 : 125.0) Transducin family protein / WD-40... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 263 298
IPR001680 WD40_repeat 354 389
IPR022052 Histone-bd_RBBP4_N 46 111
No external refs found!