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  5. Bradi5g23880

Bradi5g23880


Description : Calcium-dependent lipid-binding (CaLB domain) family protein


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g23880
Cluster HCCA clusters: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
HORVU5Hr1G084010.1 No alias membrane tethering protein (SYT1) of... 0.03 Orthogroups_2024-Update
Pp1s16_198V6 No alias integral membrane single C2 domain protein 0.02 Orthogroups_2024-Update
Seita.2G290200.1 No alias membrane tethering protein (SYT1) of... 0.03 Orthogroups_2024-Update
Sobic.001G283600.1 No alias membrane tethering protein (SYT1) of... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008081 phosphoric diester hydrolase activity IEP Predicted GO
MF GO:0008135 translation factor activity, RNA binding IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
BP GO:0016073 snRNA metabolic process IEP Predicted GO
BP GO:0016180 snRNA processing IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0034472 snRNA 3'-end processing IEP Predicted GO
BP GO:0034477 U6 snRNA 3'-end processing IEP Predicted GO
BP GO:0043628 ncRNA 3'-end processing IEP Predicted GO
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 82 260
IPR000008 C2_dom 274 378
IPR000008 C2_dom 459 560
No external refs found!