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  5. Bradi5g23932

Bradi5g23932


Description : Plant protein of unknown function (DUF247)


Gene families : OG_42_0000095 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g23932
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
Glyma.06G304300 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.16G161200 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os03g06730 No alias plant protein of unknown function domain containing... 0.02 Orthogroups_2024-Update
LOC_Os09g12840 No alias plant protein of unknown function domain containing... 0.03 Orthogroups_2024-Update
PSME_00032260-RA No alias (at3g50170 : 107.0) Plant protein of unknown function... 0.02 Orthogroups_2024-Update
PSME_00033905-RA No alias (at3g50160 : 90.1) Plant protein of unknown function... 0.02 Orthogroups_2024-Update
Potri.001G017700 No alias Plant protein of unknown function (DUF247) 0.03 Orthogroups_2024-Update
Potri.006G251500 No alias Function unknown 0.02 Orthogroups_2024-Update
Seita.8G142600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen01g021850 No alias Plant protein of unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004158 DUF247_pln 116 295
No external refs found!