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  5. Bradi5g24140

Bradi5g24140


Description : endonuclease 4


Gene families : OG_42_0001102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g24140
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi5g24430 No alias endonuclease 2 0.02 Orthogroups_2024-Update
Brara.I05177.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.03 Orthogroups_2024-Update
Glyma.08G058100 No alias endonuclease 4 0.03 Orthogroups_2024-Update
Potri.011G044500 No alias bifunctional nuclease i 0.02 Orthogroups_2024-Update
Seita.5G087300.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004519 endonuclease activity IEA InterProScan predictions
BP GO:0006308 DNA catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 24 276
No external refs found!