Bradi5g24360

Description : AINTEGUMENTA-like 5

Gene families : OG_42_0000060 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000060_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi5g24360
Cluster	HCCA clusters: Cluster_311

Target	Alias	Description	ECC score	Gene Family Method
Glyma.08G227700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G096900	No alias	AINTEGUMENTA-like 5	0.03	Orthogroups_2024-Update
Potri.016G084500	No alias	related to AP2.7	0.03	Orthogroups_2024-Update
Potri.018G091600	No alias	AINTEGUMENTA-like 5	0.02	Orthogroups_2024-Update
Pp1s17_137V6	No alias	ap2 domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.3G033600.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.03	Orthogroups_2024-Update
Sobic.005G021000.1	No alias	AP2-type transcription factor *(WRI/AIL)	0.02	Orthogroups_2024-Update
Sopen01g040570	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen02g037720	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen03g036630	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005672	transcription factor TFIIA complex	IEP	Predicted GO
BP	GO:0006367	transcription initiation from RNA polymerase II promoter	IEP	Predicted GO
BP	GO:0009309	amine biosynthetic process	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0030410	nicotianamine synthase activity	IEP	Predicted GO
BP	GO:0030417	nicotianamine metabolic process	IEP	Predicted GO
BP	GO:0030418	nicotianamine biosynthetic process	IEP	Predicted GO
BP	GO:0042401	cellular biogenic amine biosynthetic process	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
BP	GO:0072351	tricarboxylic acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	245	295
IPR001471	AP2/ERF_dom	143	201

External Links

No external refs found!