Description : squamosa promoter binding protein-like 8
Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi5g24670 | |
Cluster | HCCA clusters: Cluster_141 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Bradi4g34667 | No alias | Squamosa promoter-binding protein-like (SBP domain)... | 0.02 | Orthogroups_2024-Update | |
Glyma.06G168600 | No alias | Squamosa promoter-binding protein-like (SBP domain)... | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | IEA | InterProScan predictions |
CC | GO:0005634 | nucleus | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004519 | endonuclease activity | IEP | Predicted GO |
BP | GO:0006308 | DNA catabolic process | IEP | Predicted GO |
BP | GO:0006855 | drug transmembrane transport | IEP | Predicted GO |
BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
MF | GO:0015238 | drug transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Predicted GO |
MF | GO:0015297 | antiporter activity | IEP | Predicted GO |
BP | GO:0015893 | drug transport | IEP | Predicted GO |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Predicted GO |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Predicted GO |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Predicted GO |
BP | GO:0046700 | heterocycle catabolic process | IEP | Predicted GO |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004333 | SBP_dom | 186 | 260 |
No external refs found! |