1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g078890

Solyc02g078890


Description : LOW QUALITY:F-box associated ubiquitination effector family protein (AHRD V3.3 --* AT3G23685.1)


Gene families : OG_42_0010918 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0010918_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g078890
Cluster HCCA clusters: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
Brara.H02727.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g078870 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0004312 fatty acid synthase activity IEP Predicted GO
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP Predicted GO
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
MF GO:0051213 dioxygenase activity IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!