Description : Cleavage/polyadenylation specificity factor, 25kDa subunit
Gene families : OG_42_0002246 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002246_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi5g26810 | |
Cluster | HCCA clusters: Cluster_54 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
HORVU7Hr1G078670.4 | No alias | component *(CPFS5/CFIm25) of Cleavage Factor I (CF-Im) complex | 0.04 | Orthogroups_2024-Update | |
LOC_Os08g30820 | No alias | cleavage and polyadenylation specificity factor subunit... | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003729 | mRNA binding | IEA | InterProScan predictions |
CC | GO:0005849 | mRNA cleavage factor complex | IEA | InterProScan predictions |
BP | GO:0006378 | mRNA polyadenylation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0043531 | ADP binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR016706 | Cleav_polyA_spec_factor_su5 | 95 | 282 |
No external refs found! |