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  5. Bradi5g26812

Bradi5g26812


Description : homolog of DNA mismatch repair protein MSH3


Gene families : OG_42_0004732 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004732_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g26812
Cluster HCCA clusters: Cluster_30


Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006298 mismatch repair IEA InterProScan predictions
MF GO:0030983 mismatched DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015078 proton transmembrane transporter activity IEP Predicted GO
MF GO:0015291 secondary active transmembrane transporter activity IEP Predicted GO
MF GO:0015297 antiporter activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
InterPro domains Description Start Stop
IPR007860 DNA_mmatch_repair_MutS_con_dom 242 316
IPR007696 DNA_mismatch_repair_MutS_core 441 773
IPR007695 DNA_mismatch_repair_MutS-lik_N 112 224
IPR000432 DNA_mismatch_repair_MutS_C 828 1034
IPR007861 DNA_mismatch_repair_MutS_clamp 656 732
No external refs found!