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  5. Bradi5g27140

Bradi5g27140


Description : F-box/RNI-like superfamily protein


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g27140
Cluster HCCA clusters: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Bradi3g20141 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Orthogroups_2024-Update
Bradi3g36546 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU3Hr1G014530.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU5Hr1G044920.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G058840.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G074590.2 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g51270 No alias OsFBX108 - F-box domain containing protein, expressed 0.04 Orthogroups_2024-Update
Seita.4G249800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:1901605 alpha-amino acid metabolic process IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 55
No external refs found!