1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi5g27280

Bradi5g27280


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_42_0000045 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000045_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g27280
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Bradi1g13060 No alias osmotin 34 0.05 Orthogroups_2024-Update
Brara.H01849.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.06G023900 No alias Pathogenesis-related thaumatin superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G220700 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
HORVU4Hr1G063730.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os12g43450 No alias thaumatin family domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_132199g0010 No alias (at1g20030 : 303.0) Pathogenesis-related thaumatin... 0.03 Orthogroups_2024-Update
Mp1g15130.1 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.01 Orthogroups_2024-Update
Potri.001G102400 No alias osmotin 34 0.02 Orthogroups_2024-Update
Potri.001G107700 No alias osmotin 34 0.02 Orthogroups_2024-Update
Potri.005G112600 No alias Pathogenesis-related thaumatin superfamily protein 0.02 Orthogroups_2024-Update
Potri.009G132200 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G439100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen10g034280 No alias Thaumatin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
InterPro domains Description Start Stop
IPR001938 Thaumatin 37 256
No external refs found!