Bradi5g27660

Description : CYS, MET, PRO, and GLY protein 2

Gene families : OG_42_0000112 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000112_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi5g27660
Cluster	HCCA clusters: Cluster_32

Target	Alias	Description	ECC score	Gene Family Method
A4A49_22370	No alias	u-box domain-containing protein 26	0.02	Orthogroups_2024-Update
At1g49780	No alias	U-box domain-containing protein 26...	0.03	Orthogroups_2024-Update
Brara.A02878.1	No alias	U-Box-group-III E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Brara.E00873.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Brara.E02265.1	No alias	U-Box-group-III E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Glyma.07G106000	No alias	ARM repeat superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G312700	No alias	plant U-box 23	0.02	Orthogroups_2024-Update
LOC_Os02g46500	No alias	U-box, putative, expressed	0.02	Orthogroups_2024-Update
MA_415393g0010	No alias	(at3g19380 : 146.0) plant U-box 25 (PUB25); FUNCTIONS...	0.02	Orthogroups_2024-Update
PSME_00043995-RA	No alias	(at1g49780 : 227.0) plant U-box 26 (PUB26); FUNCTIONS...	0.02	Orthogroups_2024-Update
Potri.009G016100	No alias	plant U-box 24	0.02	Orthogroups_2024-Update
Potri.009G016200	No alias	plant U-box 23	0.03	Orthogroups_2024-Update
Seita.9G474100.1	No alias	E3 ubiquitin ligase	0.03	Orthogroups_2024-Update
Sobic.001G441100.1	No alias	E3 ubiquitin ligase	0.02	Orthogroups_2024-Update
Sobic.004G169900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc01g080920	No alias	LOW QUALITY:U-box domain-containing protein (AHRD V3.3...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016567	protein ubiquitination	IEA	InterProScan predictions
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003613	Ubox_domain	3	73

External Links

No external refs found!