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  5. Sopen07g018510

Sopen07g018510


Description : WD domain, G-beta repeat


Gene families : OG_42_0003881 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003881_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g018510
Cluster HCCA clusters: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
Glyma.15G169800 No alias Transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Seita.5G291000.1 No alias component *(CAF1c/MSI) of CAF1 histone chaperone complex... 0.02 Orthogroups_2024-Update
evm.model.contig_3397.20 No alias (at2g19520 : 191.0) Controls flowering.; FVE; FUNCTIONS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 355 394
IPR001680 WD40_repeat 313 345
IPR001680 WD40_repeat 265 300
IPR001680 WD40_repeat 196 230
IPR022052 Histone-bd_RBBP4_N 48 114
No external refs found!