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  5. Solyc02g078970

Solyc02g078970


Description : Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT1G10580.1)


Gene families : OG_42_0006194 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g078970
Cluster HCCA clusters: Cluster_182


Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
MF GO:0003909 DNA ligase activity IEP Predicted GO
MF GO:0003910 DNA ligase (ATP) activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004298 threonine-type endopeptidase activity IEP Predicted GO
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005839 proteasome core complex IEP Predicted GO
CC GO:0005849 mRNA cleavage factor complex IEP Predicted GO
BP GO:0006310 DNA recombination IEP Predicted GO
BP GO:0006378 mRNA polyadenylation IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016874 ligase activity IEP Predicted GO
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Predicted GO
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Predicted GO
BP GO:0031123 RNA 3'-end processing IEP Predicted GO
BP GO:0031124 mRNA 3'-end processing IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0052736 beta-glucanase activity IEP Predicted GO
MF GO:0052861 glucan endo-1,3-beta-glucanase activity, C-3 substituted reducing group IEP Predicted GO
MF GO:0070003 threonine-type peptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 284 322
IPR001680 WD40_repeat 370 407
IPR001680 WD40_repeat 241 279
IPR001680 WD40_repeat 463 498
IPR001680 WD40_repeat 504 541
No external refs found!