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  5. Sopen07g021630

Sopen07g021630


Description : PPR repeat family


Gene families : OG_42_0007340 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007340_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g021630
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Bradi3g02670 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
PSME_00025720-RA No alias (at1g71210 : 465.0) Pentatricopeptide repeat (PPR)... 0.04 Orthogroups_2024-Update
PSME_00031442-RA No alias (at1g71210 : 394.0) Pentatricopeptide repeat (PPR)... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 196 223
IPR002885 Pentatricopeptide_repeat 304 329
IPR002885 Pentatricopeptide_repeat 550 574
IPR002885 Pentatricopeptide_repeat 616 645
IPR002885 Pentatricopeptide_repeat 476 498
IPR002885 Pentatricopeptide_repeat 857 886
IPR002885 Pentatricopeptide_repeat 686 711
IPR002885 Pentatricopeptide_repeat 367 416
No external refs found!