Sopen07g021830

Description : AP2 domain

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g021830
Cluster	HCCA clusters: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
A4A49_39586	No alias	ethylene-responsive transcription factor erf106	0.03	Orthogroups_2024-Update
At1g15360	No alias	Ethylene-responsive transcription factor WIN1...	0.02	Orthogroups_2024-Update
At1g72360	No alias	Integrase-type DNA-binding superfamily protein...	0.02	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.03	Orthogroups_2024-Update
Bradi2g29960	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g17480	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Brara.F03559.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.G02224.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.04	Orthogroups_2024-Update
Glyma.03G159800	No alias	ethylene responsive element binding factor 3	0.02	Orthogroups_2024-Update
Glyma.10G007000	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.13G298600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G070000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU1Hr1G055710.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
HORVU6Hr1G060140.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
HORVU7Hr1G037180.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
MA_78784g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
PSME_00040934-RA	No alias	(at5g64750 : 100.0) Encodes a putative transcription...	0.03	Orthogroups_2024-Update
PSME_00054473-RA	No alias	(at5g64750 : 103.0) Encodes a putative transcription...	0.02	Orthogroups_2024-Update
PSME_00056324-RA	No alias	(at5g11590 : 111.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
Potri.001G154200	No alias	ethylene responsive element binding factor 5	0.02	Orthogroups_2024-Update
Potri.001G397200	No alias	ethylene responsive element binding factor 4	0.03	Orthogroups_2024-Update
Potri.005G168700	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.006G069400	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.009G101900	No alias	redox responsive transcription factor 1	0.02	Orthogroups_2024-Update
Potri.010G183700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.014G047000	No alias	ethylene-responsive element binding factor 13	0.04	Orthogroups_2024-Update
Potri.016G126100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Pp1s136_219V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s53_80V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G330800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.1G341100.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.6G235100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G502300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G319700.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Solyc04g014530	No alias	Ethylene Response Factor C.2	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update
Solyc09g089920	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	2	44

External Links

No external refs found!

Sopen07g021830

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation