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  5. Sopen07g022810

Sopen07g022810


Description : Pectinesterase


Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g022810
Cluster HCCA clusters: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
A4A49_15905 No alias putative pectinesterase 8 0.05 Orthogroups_2024-Update
A4A49_38924 No alias putative pectinesterase 53 0.05 Orthogroups_2024-Update
At3g24130 No alias Probable pectinesterase 29... 0.03 Orthogroups_2024-Update
At5g07430 No alias Probable pectinesterase 50... 0.03 Orthogroups_2024-Update
Bradi2g19420 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g44500 No alias pectinesterase 11 0.04 Orthogroups_2024-Update
Brara.B00244.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.C03630.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.F03540.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Brara.I05452.1 No alias pectin methylesterase 0.05 Orthogroups_2024-Update
Glyma.07G125100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G033000 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os01g53990 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g12410 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os11g45730 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_101720g0010 No alias (at3g29090 : 389.0) Encodes an atypical pectin... 0.02 Orthogroups_2024-Update
MA_10267810g0010 No alias (at5g47500 : 480.0) Pectin lyase-like superfamily... 0.02 Orthogroups_2024-Update
Mp2g01420.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Mp5g03920.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Mp5g03930.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
PSME_00022123-RA No alias (at3g29090 : 421.0) Encodes an atypical pectin... 0.04 Orthogroups_2024-Update
PSME_00033773-RA No alias (at2g36710 : 272.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00045911-RA No alias (at5g19730 : 469.0) Pectin lyase-like superfamily... 0.03 Orthogroups_2024-Update
Potri.001G364200 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.005G012800 No alias Pectin lyase-like superfamily protein 0.02 Orthogroups_2024-Update
Pp1s45_249V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Pp1s55_167V6 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G027700.1 No alias pectin methylesterase 0.02 Orthogroups_2024-Update
Seita.5G313900.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Sobic.002G138400.1 No alias pectin methylesterase 0.03 Orthogroups_2024-Update
Solyc04g080530 No alias Pectinesterase (AHRD V3.3 *** K4BVD2_SOLLC) 0.02 Orthogroups_2024-Update
Sopen01g030950 No alias Pectinesterase 0.04 Orthogroups_2024-Update
Sopen10g033270 No alias Pectinesterase 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 93 386
No external refs found!