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  5. Sopen07g022840

Sopen07g022840


Description : MULE transposase domain


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g022840
Cluster HCCA clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Bradi2g37795 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
Bradi4g16767 No alias FAR1-related sequence 5 0.02 Orthogroups_2024-Update
HORVU2Hr1G028850.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os02g39540 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g07010 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Potri.009G158400 No alias FAR1-related sequence 3 0.03 Orthogroups_2024-Update
Seita.4G225600.1 No alias FRS/FRF-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.001G343700.1 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 240 333
IPR004330 FAR1_DNA_bnd_dom 76 157
IPR007527 Znf_SWIM 527 554
No external refs found!