Sopen07g022850

Description : FAR1 DNA-binding domain

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g022850
Cluster	HCCA clusters: Cluster_226

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G155980	No alias	FAR1-related sequence 6	0.04	Orthogroups_2024-Update
Glyma.08G227500	No alias	FAR1-related sequence 3	0.03	Orthogroups_2024-Update
Glyma.09G012900	No alias	FAR1-related sequence 10	0.02	Orthogroups_2024-Update
HORVU6Hr1G055990.3	No alias	FRS/FRF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.3G094700.1	No alias	FRS/FRF-type transcription factor	0.02	Orthogroups_2024-Update
Solyc01g096850	No alias	Protein FAR1-RELATED SEQUENCE 3 (AHRD V3.3 *** A0A0B2S126_GLYSO)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004330	FAR1_DNA_bnd_dom	91	193
IPR007527	Znf_SWIM	579	604
IPR018289	MULE_transposase_dom	291	383

External Links

No external refs found!