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  5. Sopen07g023150

Sopen07g023150


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000449 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g023150
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
A4A49_38454 No alias transcription factor pif5 0.05 Orthogroups_2024-Update
At2g20180 No alias Transcription factor PIF1... 0.07 Orthogroups_2024-Update
At3g59060 No alias Transcription factor PIF5... 0.03 Orthogroups_2024-Update
Bradi2g11100 No alias phytochrome interacting factor 3 0.02 Orthogroups_2024-Update
Brara.C02178.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Brara.C04242.1 No alias bHLH-type transcription factor 0.03 Orthogroups_2024-Update
Brara.D02603.1 No alias regulatory protein *(PIF) of red/far-red light... 0.04 Orthogroups_2024-Update
Brara.H01713.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04061.1 No alias regulatory protein *(PIF) of red/far-red light... 0.05 Orthogroups_2024-Update
Brara.I05268.1 No alias regulatory protein *(PIF) of red/far-red light... 0.05 Orthogroups_2024-Update
GRMZM2G016756 No alias phytochrome interacting factor 4 0.03 Orthogroups_2024-Update
Glyma.08G303900 No alias phytochrome interacting factor 4 0.05 Orthogroups_2024-Update
Glyma.18G115700 No alias phytochrome interacting factor 4 0.04 Orthogroups_2024-Update
HORVU5Hr1G093310.11 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Pp1s147_126V6 No alias helix-loop-helix dna-binding domain containing expressed 0.02 Orthogroups_2024-Update
Pp1s69_37V6 No alias dna binding 0.03 Orthogroups_2024-Update
Seita.9G067200.1 No alias regulatory protein *(PIF) of red/far-red light... 0.02 Orthogroups_2024-Update
Sobic.001G068301.1 No alias bHLH-type transcription factor 0.05 Orthogroups_2024-Update
Solyc07g043580 No alias bHLH transcription factor 052 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 335 381
No external refs found!