Solyc02g079440

Description : FAD-binding Berberine family protein (AHRD V3.3 *** AT4G20860.1)

Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc02g079440
Cluster	HCCA clusters: Cluster_210

Target	Alias	Description	ECC score	Gene Family Method
A4A49_21422	No alias	reticuline oxidase-like protein	0.02	Orthogroups_2024-Update
Bradi3g16460	No alias	FAD-binding Berberine family protein	0.02	Orthogroups_2024-Update
Brara.I01843.1	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor	0.03	Orthogroups_2024-Update
Brara.I01844.1	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor	0.03	Orthogroups_2024-Update
GRMZM2G173105	No alias	FAD-binding Berberine family protein	0.04	Orthogroups_2024-Update
MA_162773g0010	No alias	(at4g20860 : 377.0) FAD-binding Berberine family...	0.02	Orthogroups_2024-Update
MA_5468901g0010	No alias	(at5g44400 : 157.0) FAD-binding Berberine family...	0.03	Orthogroups_2024-Update
PSME_00036068-RA	No alias	(at1g30760 : 377.0) FAD-binding Berberine family...	0.03	Orthogroups_2024-Update
Potri.001G459200	No alias	FAD-binding Berberine family protein	0.02	Orthogroups_2024-Update
Potri.001G470100	No alias	FAD-binding Berberine family protein	0.03	Orthogroups_2024-Update
Seita.4G178000.1	No alias	EC_1.1 oxidoreductase acting on CH-OH group of donor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	InterProScan predictions
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004869	cysteine-type endopeptidase inhibitor activity	IEP	Predicted GO
CC	GO:0009522	photosystem I	IEP	Predicted GO
CC	GO:0009579	thylakoid	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006094	Oxid_FAD_bind_N	78	214
IPR012951	BBE	485	541

External Links

No external refs found!