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  5. Sopen07g023170

Sopen07g023170


Description : PPR repeat family


Gene families : OG_42_0008082 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008082_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen07g023170
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
448320 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g14950 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
Brara.I04060.1 No alias plastidial RNA processing factor *(PPR287) 0.02 Orthogroups_2024-Update
Glyma.20G103800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os08g09270 No alias pentatricopeptide, putative, expressed 0.04 Orthogroups_2024-Update
Pp1s6_191V6 No alias F17J16.90; pentatricopeptide (PPR) repeat-containing... 0.02 Orthogroups_2024-Update
Sobic.007G069400.1 No alias plastidial RNA processing factor *(PPR287) 0.05 Orthogroups_2024-Update
Solyc07g043600 No alias Pentatricopeptide repeat-containing protein, putative... 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 248 291
IPR002885 Pentatricopeptide_repeat 175 220
IPR002885 Pentatricopeptide_repeat 314 362
IPR002885 Pentatricopeptide_repeat 384 433
IPR002885 Pentatricopeptide_repeat 455 499
IPR002885 Pentatricopeptide_repeat 146 171
No external refs found!