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  5. Solyc02g079450

Solyc02g079450


Description : FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2)


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g079450
Cluster HCCA clusters: Cluster_308

Target Alias Description ECC score Gene Family Method Actions
A4A49_00769 No alias reticuline oxidase-like protein 0.03 Orthogroups_2024-Update
A4A49_21422 No alias reticuline oxidase-like protein 0.03 Orthogroups_2024-Update
Brara.A01131.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.G00508.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Brara.G01552.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I01844.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.04G113500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080200 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080600 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G017270.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
LOC_Os06g35590 No alias reticuline oxidase-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g35650 No alias reticuline oxidase-like protein precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_162773g0010 No alias (at4g20860 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
MA_186285g0010 No alias (at1g30760 : 375.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G462100 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G162732 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.011G162800 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.019G063400 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Seita.4G178200.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Solyc02g022860 No alias FAD-binding Berberine family protein, putative (AHRD... 0.03 Orthogroups_2024-Update
Solyc02g070070 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1) 0.03 Orthogroups_2024-Update
Solyc02g070120 No alias No description available 0.03 Orthogroups_2024-Update
Solyc02g070130 No alias No description available 0.04 Orthogroups_2024-Update
Solyc06g065060 No alias FAD-binding Berberine family protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005092 GDP-dissociation inhibitor activity IEP Predicted GO
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
MF GO:0030570 pectate lyase activity IEP Predicted GO
BP GO:0032957 inositol trisphosphate metabolic process IEP Predicted GO
BP GO:0043647 inositol phosphate metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0047325 inositol tetrakisphosphate 1-kinase activity IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0051765 inositol tetrakisphosphate kinase activity IEP Predicted GO
MF GO:0051766 inositol trisphosphate kinase activity IEP Predicted GO
MF GO:0052725 inositol-1,3,4-trisphosphate 6-kinase activity IEP Predicted GO
MF GO:0052726 inositol-1,3,4-trisphosphate 5-kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 70 207
IPR012951 BBE 475 530
No external refs found!