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  5. Sopen07g023420

Sopen07g023420


Description : PsbP


Gene families : OG_42_0003661 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003661_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g023420
Cluster HCCA clusters: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
A4A49_25930 No alias oxygen-evolving enhancer protein 2-1, chloroplastic 0.02 Orthogroups_2024-Update
A4A49_63454 No alias oxygen-evolving enhancer protein 2-2, chloroplastic 0.09 Orthogroups_2024-Update
At1g06680 No alias Oxygen-evolving enhancer protein 2-1, chloroplastic... 0.05 Orthogroups_2024-Update
Bradi1g58160 No alias photosystem II subunit P-1 0.05 Orthogroups_2024-Update
Brara.H02952.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.05 Orthogroups_2024-Update
Brara.I05398.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.03 Orthogroups_2024-Update
Brara.J00459.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.05 Orthogroups_2024-Update
Cre12.g550850 No alias photosystem II subunit P-1 0.04 Orthogroups_2024-Update
GRMZM2G047954 No alias photosystem II subunit P-1 0.04 Orthogroups_2024-Update
Glyma.02G282500 No alias photosystem II subunit P-1 0.08 Orthogroups_2024-Update
Glyma.08G304200 No alias photosystem II subunit P-1 0.06 Orthogroups_2024-Update
Glyma.14G031800 No alias photosystem II subunit P-1 0.04 Orthogroups_2024-Update
Glyma.18G114900 No alias photosystem II subunit P-1 0.07 Orthogroups_2024-Update
HORVU2Hr1G060880.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.03 Orthogroups_2024-Update
Kfl00239_0120 kfl00239_0120_v1.1 (at1g06680 : 244.0) Encodes a 23 kD extrinsic protein... 0.05 Orthogroups_2024-Update
LOC_Os07g04840 No alias PsbP, putative, expressed 0.05 Orthogroups_2024-Update
Mp5g20290.1 No alias component PsbP of PS-II oxygen-evolving center 0.03 Orthogroups_2024-Update
Pp1s11_39V6 No alias oxygen-evolving enhancer protein chloroplast 0.12 Orthogroups_2024-Update
Pp1s135_79V6 No alias oxygen-evolving enhancer protein chloroplast 0.07 Orthogroups_2024-Update
Pp1s63_71V6 No alias oxygen-evolving enhancer protein chloroplast 0.06 Orthogroups_2024-Update
Pp1s75_141V6 No alias oxygen-evolving enhancer protein chloroplast 0.08 Orthogroups_2024-Update
Seita.4G207000.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.08 Orthogroups_2024-Update
Sobic.002G030200.1 No alias component *(PsbP) of PS-II oxygen-evolving center 0.06 Orthogroups_2024-Update
Solyc07g044860 No alias psbXphotosystem II 23 kDa protein 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA InterProScan predictions
CC GO:0009523 photosystem II IEA InterProScan predictions
CC GO:0009654 photosystem II oxygen evolving complex IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0019898 extrinsic component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002683 PsbP 88 256
No external refs found!