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  5. Sopen07g023440

Sopen07g023440


Description : Reticulon


Gene families : OG_42_0000160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g023440
Cluster HCCA clusters: Cluster_283

Target Alias Description ECC score Gene Family Method Actions
Cre06.g308950 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
Glyma.09G180800 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Glyma.11G201400 No alias VIRB2-interacting protein 1 0.03 Orthogroups_2024-Update
Glyma.20G163700 No alias VIRB2-interacting protein 1 0.03 Orthogroups_2024-Update
LOC_Os01g12650 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g21840 No alias reticulon domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g24770 No alias reticulon domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.001G300400 No alias Reticulon family protein 0.02 Orthogroups_2024-Update
Potri.005G206800 No alias Reticulon family protein 0.03 Orthogroups_2024-Update
Potri.015G027000 No alias VIRB2-interacting protein 1 0.02 Orthogroups_2024-Update
Seita.4G162900.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.02 Orthogroups_2024-Update
Seita.5G279000.1 No alias ER-tubule curvature-inducing protein *(Reticulon) 0.03 Orthogroups_2024-Update
evm.model.tig00000704.69 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003388 Reticulon 69 223
No external refs found!