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  5. Sopen07g023840

Sopen07g023840


Description : Rubisco LSMT substrate-binding


Gene families : OG_42_0006949 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006949_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g023840
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
80789 No alias Rubisco methyltransferase family protein 0.02 Orthogroups_2024-Update
Bradi3g56450 No alias Rubisco methyltransferase family protein 0.04 Orthogroups_2024-Update
Cre12.g503800 No alias Rubisco methyltransferase family protein 0.02 Orthogroups_2024-Update
GRMZM2G077258 No alias Rubisco methyltransferase family protein 0.03 Orthogroups_2024-Update
Glyma.13G010500 No alias Rubisco methyltransferase family protein 0.03 Orthogroups_2024-Update
Pp1s13_7V6 No alias ribulose- -bisphosphate carboxylase oxygenase small... 0.03 Orthogroups_2024-Update
Seita.1G302100.1 No alias lysine N-methyltransferase involved in RuBisCo... 0.03 Orthogroups_2024-Update
Sobic.004G255500.1 No alias lysine N-methyltransferase involved in RuBisCo... 0.02 Orthogroups_2024-Update
Solyc07g045310 No alias Ribulose-1,5 bisphosphate carboxylase/oxygenase large... 0.08 Orthogroups_2024-Update
evm.model.tig00020554.100 No alias (at3g07670 : 149.0) Rubisco methyltransferase family... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001214 SET_dom 98 302
IPR015353 Rubisco_LSMT_subst-bd 335 468
No external refs found!