Sopen07g024050

Description : SWIM zinc finger

Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g024050
Cluster	HCCA clusters: Cluster_78

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os07g01270	No alias	transposon protein, putative, unclassified, expressed	0.03	Orthogroups_2024-Update
Seita.2G388600.1	No alias	FRS/FRF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc06g068200	No alias	Far1-related sequence 6 (AHRD V3.3 *** A0A061G8J5_THECC)	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	113	138

External Links

No external refs found!