Sopen07g024120

Description : Pescadillo N-terminus

Gene families : OG_42_0005471 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005471_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g024120
Cluster	HCCA clusters: Cluster_148

Target	Alias	Description	ECC score	Gene Family Method
166421	No alias	pescadillo-related	0.03	Orthogroups_2024-Update
Kfl00136_0090	kfl00136_0090_v1.1	(at5g14520 : 498.0) pescadillo-related; FUNCTIONS IN:...	0.01	Orthogroups_2024-Update
Sobic.001G126600.1	No alias	component *(PES) of ribosome PES-BOP1-WDR12 (PeBoW) complex	0.03	Orthogroups_2024-Update
Solyc07g047670	No alias	Pescadillo homolog (AHRD V3.3 *** K4CEX3_SOLLC)	0.07	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005730	nucleolus	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0022613	ribonucleoprotein complex biogenesis	None	Extended
BP	GO:0042254	ribosome biogenesis	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
CC	GO:0044422	organelle part	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044428	nuclear part	None	Extended
CC	GO:0044446	intracellular organelle part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001357	BRCT_dom	258	344
IPR010613	PES	2	194

External Links

No external refs found!