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  5. Sopen07g024370

Sopen07g024370


Description : OST-HTH/LOTUS domain


Gene families : OG_42_0002935 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g024370
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
112009 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.03 Orthogroups_2024-Update
Brara.C04037.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.02G298000 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.03 Orthogroups_2024-Update
Glyma.08G326000 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.03 Orthogroups_2024-Update
Glyma.14G015700 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.05 Orthogroups_2024-Update
LOC_Os08g03310 No alias zinc finger family protein, putative, expressed 0.04 Orthogroups_2024-Update
MA_33942g0010 No alias (at3g52980 : 250.0) Zinc finger (CCCH-type) family... 0.02 Orthogroups_2024-Update
Mp5g21520.1 No alias C3H zinc finger transcription factor 0.01 Orthogroups_2024-Update
Potri.014G165500 No alias CCCH-type zinc fingerfamily protein with RNA-binding domain 0.03 Orthogroups_2024-Update
Seita.9G351900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G323701.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g047940 No alias Zinc finger transcription factor 49 0.14 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025605 OST-HTH/LOTUS_dom 222 299
IPR032297 Torus 172 200
IPR000504 RRM_dom 340 384
No external refs found!