Sopen07g024850

Description : Piwi domain

Gene families : OG_42_0000134 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000134_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g024850
Cluster	HCCA clusters: Cluster_385

Target	Alias	Description	ECC score	Gene Family Method	Actions
Seita.4G225900.1	No alias	miRNA recruiting factor (AGO) of RNA-induced silencing...	0.03	Orthogroups_2024-Update
Seita.9G019800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032472	ArgoL2	413	458
IPR003100	PAZ_dom	272	403
IPR003165	Piwi	557	862
IPR014811	ArgoL1	218	265
IPR032474	Argonaute_N	48	206

External Links

No external refs found!