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  5. Sopen07g026580

Sopen07g026580


Description : GH3 auxin-responsive promoter


Gene families : OG_42_0000128 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000128_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g026580
Cluster HCCA clusters: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
A4A49_17823 No alias putative indole-3-acetic acid-amido synthetase gh3.1 0.02 Orthogroups_2024-Update
At2g47750 No alias Putative indole-3-acetic acid-amido synthetase GH3.9... 0.04 Orthogroups_2024-Update
At4g27260 No alias Indole-3-acetic acid-amido synthetase GH3.5... 0.03 Orthogroups_2024-Update
Bradi1g18200 No alias putative indole-3-acetic acid-amido synthetase GH3.9 0.03 Orthogroups_2024-Update
Brara.E01559.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I05219.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.K00646.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G410567 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Glyma.12G108900 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G092890.5 No alias jasmonoyl-amino acid synthetase *(JAR1) 0.03 Orthogroups_2024-Update
MA_16777g0010 No alias (at1g28130 : 670.0) encodes an IAA-amido synthase that... 0.02 Orthogroups_2024-Update
PSME_00030829-RA No alias (at5g54510 : 861.0) Encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
PSME_00043353-RA No alias (at5g54510 : 867.0) Encodes an IAA-amido synthase that... 0.03 Orthogroups_2024-Update
Potri.007G050300 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Potri.013G144300 No alias Auxin-responsive GH3 family protein 0.04 Orthogroups_2024-Update
Potri.019G103500 No alias Auxin-responsive GH3 family protein 0.02 Orthogroups_2024-Update
Sobic.003G306500.1 No alias indole-3-acetic acid-amido synthetase *(GH3) 0.02 Orthogroups_2024-Update
Sobic.005G108300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc07g063850 No alias IAA-amido synthetase 3-9 0.02 Orthogroups_2024-Update
Sopen02g037370 No alias GH3 auxin-responsive promoter 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004993 GH3 23 572
No external refs found!