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  5. Sopen07g026890

Sopen07g026890


Description : Ring finger domain


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g026890
Cluster HCCA clusters: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
A4A49_42233 No alias putative e3 ubiquitin-protein ligase rhc1a 0.05 Orthogroups_2024-Update
At1g26800 No alias E3 ubiquitin-protein ligase MPSR1... 0.02 Orthogroups_2024-Update
At3g13228 No alias RING/U-box superfamily protein... 0.05 Orthogroups_2024-Update
Bradi4g44205 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.C02094.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.E02986.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.04G251600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G105900 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os11g04690 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g04660 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.03 Orthogroups_2024-Update
PSME_00020804-RA No alias (at3g19950 : 87.4) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Seita.8G172800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.002G176300.2 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen04g001810 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 186 228
No external refs found!