1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen07g027780

Sopen07g027780


Description : SBP domain


Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g027780
Cluster HCCA clusters: Cluster_378

Target Alias Description ECC score Gene Family Method Actions
A4A49_19670 No alias squamosa promoter-binding-like protein 6 0.02 Orthogroups_2024-Update
At1g69170 No alias Squamosa promoter-binding-like protein 6... 0.03 Orthogroups_2024-Update
Brara.I03021.1 No alias SBP-type transcription factor 0.02 Orthogroups_2024-Update
Cre01.g012200 No alias squamosa promoter-binding protein-like 12 0.01 Orthogroups_2024-Update
Cre07.g335150 No alias squamosa promoter binding protein-like 4 0.01 Orthogroups_2024-Update
GRMZM2G101511 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
GRMZM5G878561 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.02 Orthogroups_2024-Update
Glyma.02G121300 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.04 Orthogroups_2024-Update
Glyma.12G162999 No alias squamosa promoter-binding protein-like 12 0.03 Orthogroups_2024-Update
Glyma.17G080700 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 Orthogroups_2024-Update
HORVU3Hr1G094730.2 No alias SBP-type transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G073440.13 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update
Pp1s50_127V6 No alias sbp-domain protein 12 0.02 Orthogroups_2024-Update
Sobic.002G247800.1 No alias SBP-type transcription factor 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 42 115
No external refs found!