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  5. Sopen07g028100

Sopen07g028100


Description : Pollen allergen


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g028100
Cluster HCCA clusters: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
A4A49_57799 No alias putative expansin-b2 0.02 Orthogroups_2024-Update
GRMZM2G013002 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G013671 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G059785 No alias expansin B2 0.02 Orthogroups_2024-Update
GRMZM2G094990 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G342246 No alias expansin B2 0.03 Orthogroups_2024-Update
GRMZM2G401983 No alias expansin B2 0.02 Orthogroups_2024-Update
Glyma.11G166546 No alias expansin B2 0.03 Orthogroups_2024-Update
HORVU4Hr1G088080.4 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os05g15690 No alias expansin precursor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00007984-RA No alias (at2g20750 : 186.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
PSME_00041571-RA No alias (at2g20750 : 170.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
Solyc10g008440 No alias expansin B3 (AHRD V3.3 *** AT4G28250.1) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 79 158
IPR007117 Expansin_CBD 171 252
No external refs found!