Sopen07g028220

Description : Pyridoxal-dependent decarboxylase conserved domain

Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen07g028220
Cluster	HCCA clusters: Cluster_394

Target	Alias	Description	ECC score	Gene Family Method
121532	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
89475	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
Bradi3g14750	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
Bradi3g14760	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.02	Orthogroups_2024-Update
GRMZM2G108514	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.03	Orthogroups_2024-Update
Potri.013G052900	No alias	Pyridoxal phosphate (PLP)-dependent transferases...	0.03	Orthogroups_2024-Update
Seita.6G067700.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.06	Orthogroups_2024-Update
Seita.6G067800.1	No alias	EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase	0.05	Orthogroups_2024-Update
Solyc07g054280	No alias	Tyrosine decarboxylase (AHRD V3.3 *** Q000T5_ARICO)	0.03	Orthogroups_2024-Update
evm.model.contig_611.4	No alias	(q7xhl3\|tydc1_orysa : 139.0) Tyrosine decarboxylase 1...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	IEA	InterProScan predictions
BP	GO:0019752	carboxylic acid metabolic process	IEA	InterProScan predictions
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	IEA	InterProScan predictions
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050662	coenzyme binding	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	56	423

External Links

No external refs found!